PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC01G25690.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 349aa    MW: 38787.2 Da    PI: 5.3068
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC01G25690.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM62.51.3e-19461797128
              NAM   7 FhPtdeelvveyLkkkvegkklelee....vikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknratk..sgyWkatgk 88 
                       hPt++elv  yL+++v + + + ++    +i+evd+y+++P dL +      + +++++ wyfFs  +    +g rk r+++  +g W++   
  OPUNC01G25690.1  46 VHPTEQELVETYLRPRVVSGDKPSSSpcgfIIHEVDVYSANPADLTRgfapavARSSGDEAWYFFSAVRGL--KGGRKARTVDdgAGCWHSEAG 137
                      59**************888774443344447**************8557777544558889*****98775..588999976644788****99 PP

              NAM  89 dkevlsk.kgelvglkktLvfykg.rapkgektdWvmheyrl 128
                       k+v+++ +g   g ++ + f ++ ++ + +++ W+m e +l
  OPUNC01G25690.1 138 AKPVFAAsSGCRLGHRQNFSFITKdDDGQRVRSGWLMVELSL 179
                      9***99867778**********5436667789*****99876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100528.74340199IPR003441NAC domain
PfamPF023652.0E-1345178IPR003441NAC domain
SuperFamilySSF1019417.19E-2847199IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    Send to blast
MGAASRPRRH CKAPRRLDDD DDTDVFHPSE LLPNRLDDDH EDDMDVHPTE QELVETYLRP  60
RVVSGDKPSS SPCGFIIHEV DVYSANPADL TRGFAPAVAR SSGDEAWYFF SAVRGLKGGR  120
KARTVDDGAG CWHSEAGAKP VFAASSGCRL GHRQNFSFIT KDDDGQRVRS GWLMVELSLD  180
VDGQDDDEEQ LVLSKVYFSP RAPGAKKPTV AAVAMSRHKR KLSTTDIASP PPRQRRHRVS  240
SSSPEEMNAS PSPAVSAPDQ QEGDDDPDRG SISWWLRRVF GLTATFTEDE CIELNPWLKD  300
ILRPFPPPSL PTPSPSCPSP RRKLIDMPEI REFIMRGPYL GDPPSPQYE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0126090.0CP012609.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 1 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015638896.11e-166PREDICTED: uncharacterized protein LOC107276912
TrEMBLA0A0E0JM560.0A0A0E0JM56_ORYPU; Uncharacterized protein
STRINGORGLA01G0211000.11e-156(Oryza glaberrima)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP40112972
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G55210.11e-13NAC domain containing protein 63